Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase transcriptional activator flha | D3O91_08830 | Not Available | Negative | 1734789 - 1736867 | 78443.5 |
| hydrogenase expression/formation protein hype | D3O91_08835 | Not Available | Negative | 1736941 - 1737951 | 35124.6 |
| hydrogenase formation protein hypd | D3O91_08840 | Not Available | Negative | 1737948 - 1739069 | 41393.7 |
| hydrogenase assembly protein hypc | D3O91_08845 | Not Available | Negative | 1739069 - 1739341 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein hypb | D3O91_08850 | Not Available | Negative | 1739332 - 1740204 | 31566.8 |
| protein hypa | D3O91_08855 | Not Available | Negative | 1740208 - 1740558 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | D3O91_08860 | Not Available | Positive | 1740770 - 1741231 | 17627.9 |
| formate hydrogenlyase subunit 2 | D3O91_08865 | Not Available | Positive | 1741356 - 1741967 | 21874.4 |
| formate hydrogenlyase subunit 3 | D3O91_08870 | Not Available | Positive | 1741964 - 1743790 | 64127.2 |
| hydrogenase 3 membrane subunit | D3O91_08875 | Not Available | Positive | 1743793 - 1744716 | 32964.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





