Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate--coa ligase | D3M81_00605 | Not Available | Negative | 128058 - 129458 | 52372.3 |
| replication initiation negative regulator seqa | D3M81_00610 | Not Available | Negative | 129427 - 130083 | 24401.2 |
| alpha/beta hydrolase | D3M81_00615 | Not Available | Positive | 130154 - 130939 | 29831.9 |
| flavodoxin flda | D3M81_00620 | Not Available | Positive | 131021 - 131545 | 19708.0 |
| ferric iron uptake transcriptional regulator | D3M81_00625 | Not Available | Positive | 131569 - 132018 | 17261.6 |
| peptide abc transporter substrate-binding protein | D3M81_00630 | Not Available | Negative | 132080 - 133636 | 59635.1 |
| duf454 domain-containing protein | D3M81_00635 | Not Available | Negative | 133629 - 134033 | 15518.4 |
| oligopeptidase a | D3M81_00640 | Not Available | Positive | 134149 - 136188 | 77778.1 |
| beta-ketoacyl-acp synthase i | D3M81_00645 | Not Available | Negative | 136317 - 137537 | 42480.4 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D3M81_00650 | Not Available | Positive | 137711 - 139720 | 75738.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
