Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | D3M81_00050 | Not Available | Negative | 6809 - 7222 | 15326.8 |
| atp-dependent protease atp-binding subunit clpx | D3M81_00055 | Not Available | Negative | 7365 - 8615 | 45803.6 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | D3M81_00060 | Not Available | Negative | 8625 - 9206 | 21431.9 |
| trigger factor | D3M81_00065 | Not Available | Negative | 9321 - 10619 | 48249.3 |
| peptidoglycan-binding protein lysm | D3M81_00070 | Not Available | Negative | 10837 - 11277 | 15435.2 |
| neutral zinc metallopeptidase | D3M81_00075 | Not Available | Positive | 11445 - 12275 | 30206.4 |
| hslu--hslv peptidase atpase subunit | D3M81_00080 | Not Available | Negative | 12322 - 13656 | 49512.6 |
| atp-dependent protease subunit hslv | D3M81_00085 | Not Available | Negative | 13668 - 14195 | 19028.0 |
| dna recombination protein rmuc | D3M81_00090 | Not Available | Positive | 14376 - 15980 | 61090.9 |
| tigr00645 family protein | D3M81_00095 | Not Available | Positive | 16100 - 16654 | 21099.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
