Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | D3M81_04065 | Not Available | Positive | 844469 - 845554 | 39718.6 |
| type i restriction endonuclease subunit r | D3M81_04070 | Not Available | Negative | 845601 - 848765 | 119742.0 |
| fic family protein | D3M81_04075 | Not Available | Negative | 848779 - 849879 | 42146.6 |
| type vi secretion system tip protein vgrg | D3M81_04080 | Not Available | Positive | 850052 - 851701 | 63205.5 |
| preprotein translocase subunit seca | D3M81_04085 | Not Available | Positive | 851714 - 854410 | 102416.0 |
| 8-oxo-dgtp diphosphatase mutt | D3M81_04090 | Not Available | Positive | 854471 - 854887 | 15823.8 |
| dna polymerase iii subunit delta | D3M81_04095 | Not Available | Negative | 854871 - 855905 | 39913.8 |
| hypothetical protein | D3M81_04100 | Not Available | Negative | 855905 - 856408 | 18606.6 |
| leucine--trna ligase | D3M81_04105 | Not Available | Negative | 856467 - 859055 | 97625.8 |
| yggu family protein | D3M81_04110 | Not Available | Negative | 859183 - 859470 | 10801.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
