Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-protecting protein dpra | D3M81_03855 | Not Available | Negative | 801270 - 802391 | 41678.3 |
| 2-isopropylmalate synthase | D3M81_03860 | Not Available | Positive | 802926 - 804479 | 56305.3 |
| 3-isopropylmalate dehydrogenase | D3M81_03865 | Not Available | Positive | 805031 - 806107 | 38719.5 |
| 3-isopropylmalate dehydratase large subunit | D3M81_03870 | Not Available | Positive | 806210 - 807619 | 50928.4 |
| 3-isopropylmalate dehydratase small subunit | D3M81_03875 | Not Available | Positive | 807645 - 808247 | 22862.3 |
| lta synthase family protein | D3M81_03880 | Not Available | Positive | 808390 - 810048 | 63349.4 |
| superoxide dismutase | D3M81_03885 | Not Available | Positive | 810130 - 810678 | 19249.9 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | D3M81_03890 | Not Available | Negative | 810830 - 813259 | 92738.1 |
| repressor lexa | D3M81_03895 | Not Available | Positive | 813420 - 814049 | 23172.9 |
| diaminopimelate epimerase | D3M81_03900 | Not Available | Positive | 814183 - 815007 | 30465.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
