Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase type 11 | D3M81_03395 | Not Available | Negative | 693700 - 695235 | 58760.9 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D3M81_03400 | Not Available | Negative | 695502 - 696317 | 30656.8 |
| 50s ribosomal protein l33 | D3M81_03405 | Not Available | Negative | 696389 - 696559 | 6563.13 |
| 50s ribosomal protein l28 | D3M81_03410 | Not Available | Negative | 696571 - 696807 | 8985.06 |
| jab domain-containing protein | D3M81_03415 | Not Available | Negative | 697020 - 697682 | 25347.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | D3M81_03420 | Not Available | Positive | 697858 - 699066 | 43383.4 |
| dutp diphosphatase | D3M81_03425 | Not Available | Positive | 699109 - 699564 | 16519.9 |
| nucleoid occlusion factor slma | D3M81_03430 | Not Available | Positive | 699568 - 700224 | 25415.0 |
| yheu family protein | D3M81_03435 | Not Available | Positive | 700246 - 700464 | 8307.04 |
| camp-activated global transcriptional regulator crp | D3M81_03440 | Not Available | Positive | 700484 - 701161 | 25368.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
