Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter atp-binding protein | D3M81_02455 | Not Available | Positive | 506615 - 508126 | 55775.3 |
| sugar abc transporter permease | D3M81_02460 | Not Available | Positive | 508130 - 509257 | 39756.1 |
| xylose operon transcription regulator xylr | D3M81_02465 | Not Available | Positive | 509357 - 510526 | 44899.6 |
| dna-binding transcriptional repressor deor | D3M81_02470 | Not Available | Negative | 510578 - 511315 | 27275.2 |
| deoxyribose-phosphate aldolase | D3M81_02475 | Not Available | Negative | 511332 - 512006 | 24113.3 |
| ribokinase | D3M81_02480 | Not Available | Positive | 512163 - 513083 | 33514.3 |
| l-fucose:h+ symporter permease | D3M81_02485 | Not Available | Positive | 513096 - 514385 | 47662.7 |
| duf4432 family protein | D3M81_02490 | Not Available | Positive | 514396 - 515412 | 38823.5 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | D3M81_02495 | Not Available | Negative | 515459 - 516106 | 23213.8 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | D3M81_02500 | Not Available | Positive | 516472 - 517578 | 43084.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
