Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3M81_10315 | Not Available | Negative | 2088069 - 2090231 | 74078.8 |
| duf4263 domain-containing protein | D3M81_10320 | Not Available | Positive | 2090702 - 2090998 | 11776.5 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | D3M81_10325 | Not Available | Negative | 2091044 - 2093017 | 72664.9 |
| amidohydrolase | D3M81_10330 | Not Available | Negative | 2093269 - 2094543 | 46274.8 |
| trap transporter large permease subunit | D3M81_10335 | Not Available | Negative | 2094612 - 2095907 | 44594.9 |
| dipeptidase pepe | D3M81_10340 | Not Available | Negative | 2095926 - 2096630 | 25989.1 |
| type ii crispr rna-guided endonuclease cas9 | D3M81_10350 | Not Available | Positive | 2098426 - 2101593 | 121352.0 |
| type ii crispr-associated endonuclease cas1 | D3M81_10355 | Not Available | Positive | 2101648 - 2102565 | 34784.7 |
| crispr-associated endonuclease cas2 | D3M81_10360 | Not Available | Positive | 2102558 - 2102884 | 12674.8 |
| 5'-deoxynucleotidase | D3M81_10365 | Not Available | Negative | 2103819 - 2104412 | 22848.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
