Rodentibacter pneumotropicus strain FD987

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain FD987 is a rod-shaped bacterium recognized for its association with the order Rodentia, specifically affecting rodents. This strain possesses a single replicon, indicating a simpler genetic structure compared to more complex organisms that may have multiple replicons. One notable health effect associated with Rodentibacter pneumotropicus is the development of abscesses in rodents. This condition can have significant implications for the health and well-being of affected rodent populations, potentially leading to complications if not addressed. The bacterium's pathogenicity highlights its role in the microbial ecology of rodent populations, where it may affect not only individual hosts but also the overall dynamics within rodent communities. The strain is cataloged under the accession number QXNK00000000.1, which provides a reference point for researchers interested in studying its genomic characteristics and pathogenic mechanisms further. Understanding the nature of Rodentibacter pneumotropicus strain FD987 can contribute to broader insights into rodent health and the microbiological factors that influence their populations. In summary, Rodentibacter pneumotropicus strain FD987 exemplifies a pathogen that plays a role in the health of rodent hosts, specifically through the formation of abscesses, which can impact rodent populations and their ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strainstrain FD987

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain FD987

Gene Summary

Adenine Count

710592 bp

Thymine Count

706189 bp

Guanine Count

475140 bp

Cytosine Count

469558 bp

Genome Length

2361479 bp

Protein-coding Genes

2071 genes

Non-Coding Genes

176 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycerate dehydrogenaseD3M81_09795Not AvailableNegative1990957 - 199218944626.8
ribose-5-phosphate isomerase rpiaD3M81_09800Not AvailableNegative1992220 - 199287923063.2
radical sam family heme chaperone hemwD3M81_09805Not AvailableNegative1992985 - 199413643771.3
abgt family transporterD3M81_09810Not AvailableNegative1994262 - 199582456088.1
endopeptidase laD3M81_09815Not AvailableNegative1996015 - 199842989377.7
phosphoglycolate phosphataseD3M81_09820Not AvailableNegative1998555 - 199922924431.4
ribulose-phosphate 3-epimeraseD3M81_09825Not AvailableNegative1999278 - 199995224523.6
hypothetical proteinD3M81_09830Not AvailablePositive2000093 - 200073923154.7
guanylate kinaseD3M81_09835Not AvailablePositive2000760 - 200139824061.7
dna-directed rna polymerase subunit omegaD3M81_09840Not AvailablePositive2001453 - 20017199792.75

Displaying genes 1881 – 1890 of 2247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total