Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | D3M81_09240 | Not Available | Negative | 1854834 - 1856288 | 55588.1 |
| type vi secretion protein | D3M81_09245 | Not Available | Negative | 1856291 - 1856923 | 23758.6 |
| dotu family type iv/vi secretion system protein | D3M81_09250 | Not Available | Negative | 1856956 - 1857281 | 12639.6 |
| hypothetical protein | D3M81_09255 | Not Available | Positive | 1857282 - 1857537 | 10052.7 |
| type i secretion system permease/atpase | D3M81_09260 | Not Available | Positive | 1857550 - 1859679 | 80425.0 |
| hlyd family type i secretion periplasmic adaptor subunit | D3M81_09265 | Not Available | Positive | 1859681 - 1861105 | 53838.9 |
| shikimate 5-dehydrogenase | D3M81_09270 | Not Available | Positive | 1861141 - 1861956 | 29980.0 |
| uridine phosphorylase | D3M81_09275 | Not Available | Negative | 1862017 - 1862775 | 27289.7 |
| duf853 domain-containing protein | D3M81_09280 | Not Available | Negative | 1862930 - 1864429 | 54916.0 |
| mosc domain-containing protein | D3M81_09285 | Not Available | Positive | 1864550 - 1865224 | 25047.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
