Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | D3M81_06460 | Not Available | Positive | 1324683 - 1325702 | 38664.5 |
| 5'/3'-nucleotidase sure | D3M81_06465 | Not Available | Positive | 1325702 - 1326442 | 26771.7 |
| deda family protein | D3M81_06470 | Not Available | Positive | 1326482 - 1327057 | 21500.9 |
| hypothetical protein | D3M81_06475 | Not Available | Positive | 1327069 - 1327263 | 6716.18 |
| murein hydrolase activator nlpd | D3M81_06480 | Not Available | Positive | 1327277 - 1328461 | 41078.6 |
| duf4123 domain-containing protein | D3M81_06485 | Not Available | Positive | 1328707 - 1329909 | 47106.5 |
| alpha/beta hydrolase | D3M81_06490 | Not Available | Positive | 1329932 - 1332103 | 82709.2 |
| wd40 repeat domain-containing protein | D3M81_06495 | Not Available | Positive | 1332100 - 1333269 | 44246.0 |
| merr family transcriptional regulator | D3M81_06500 | Not Available | Positive | 1333410 - 1334051 | 24684.1 |
| purine-nucleoside phosphorylase | D3M81_06510 | Not Available | Negative | 1337172 - 1337891 | 25874.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
