Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain FD987 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
710592 bp
Thymine Count
706189 bp
Guanine Count
475140 bp
Cytosine Count
469558 bp
Genome Length
2361479 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | D3M81_05160 | Not Available | Negative | 1058518 - 1060593 | 79453.8 |
| paar domain-containing protein | D3M81_05165 | Not Available | Negative | 1060652 - 1060921 | 9010.93 |
| type vi secretion system contractile sheath small subunit | D3M81_05170 | Not Available | Positive | 1061206 - 1061703 | 18457.1 |
| type vi secretion system contractile sheath large subunit | D3M81_05175 | Not Available | Positive | 1061714 - 1063201 | 56301.7 |
| type vi secretion system baseplate subunit tsse | D3M81_05180 | Not Available | Positive | 1063209 - 1063625 | 15777.1 |
| type vi secretion system baseplate subunit tssg | D3M81_05190 | Not Available | Positive | 1065343 - 1065683 | 12835.3 |
| ferritin | D3M81_05195 | Not Available | Positive | 1065684 - 1065795 | 4156.83 |
| non-heme ferritin | D3M81_05200 | Not Available | Positive | 1065806 - 1066306 | 19051.8 |
| molybdopterin synthase catalytic subunit moae | D3M81_05205 | Not Available | Negative | 1066351 - 1066803 | 17280.5 |
| molybdopterin synthase sulfur carrier subunit | D3M81_05210 | Not Available | Negative | 1066805 - 1067050 | 8844.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
