Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin uptake protein tolr | D3M79_02390 | Not Available | Negative | 508972 - 509391 | 15298.7 |
| protein tolq | D3M79_02395 | Not Available | Negative | 509458 - 510150 | 25524.3 |
| tol-pal system-associated acyl-coa thioesterase | D3M79_02400 | Not Available | Negative | 510155 - 510577 | 16161.7 |
| cyd operon protein ybge | D3M79_02405 | Not Available | Negative | 510669 - 510953 | 11052.9 |
| cytochrome d ubiquinol oxidase subunit ii | D3M79_02410 | Not Available | Negative | 511064 - 512200 | 42216.9 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | D3M79_02415 | Not Available | Negative | 512215 - 513780 | 57989.9 |
| recombinase xerd | D3M79_02420 | Not Available | Positive | 514193 - 514498 | 11231.7 |
| holliday junction branch migration dna helicase ruvb | D3M79_02425 | Not Available | Negative | 514564 - 515571 | 37164.0 |
| holliday junction branch migration protein ruva | D3M79_02430 | Not Available | Negative | 515582 - 516196 | 22690.7 |
| crossover junction endodeoxyribonuclease ruvc | D3M79_02435 | Not Available | Negative | 516257 - 516829 | 20820.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
