Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | D3M79_00870 | Not Available | Negative | 187269 - 187682 | 15326.8 |
| atp-dependent protease atp-binding subunit clpx | D3M79_00875 | Not Available | Negative | 187825 - 189075 | 46003.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | D3M79_00880 | Not Available | Negative | 189085 - 189666 | 21445.9 |
| trigger factor | D3M79_00885 | Not Available | Negative | 189781 - 191079 | 48376.5 |
| peptidoglycan-binding protein lysm | D3M79_00890 | Not Available | Negative | 191297 - 191737 | 15435.2 |
| hypothetical protein | D3M79_00895 | Not Available | Positive | 191905 - 192735 | 30242.6 |
| hslu--hslv peptidase atpase subunit | D3M79_00900 | Not Available | Negative | 192782 - 194116 | 49528.6 |
| atp-dependent protease subunit hslv | D3M79_00905 | Not Available | Negative | 194128 - 194655 | 19018.0 |
| dna recombination protein rmuc | D3M79_00910 | Not Available | Positive | 194835 - 196439 | 61165.1 |
| tigr00645 family protein | D3M79_00915 | Not Available | Positive | 196559 - 197113 | 21062.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
