Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [citrate (pro-3s)-lyase] ligase | D3M79_09980 | Not Available | Negative | 2097634 - 2098713 | 40619.4 |
| d-tyrosyl-trna(tyr) deacylase | D3M79_09985 | Not Available | Negative | 2098718 - 2099152 | 15833.0 |
| virulence factor brkb family protein | D3M79_09990 | Not Available | Negative | 2099149 - 2099985 | 30986.2 |
| ychj family protein | D3M79_09995 | Not Available | Negative | 2099982 - 2100455 | 17858.4 |
| mosc domain-containing protein | D3M79_10000 | Not Available | Negative | 2100445 - 2101119 | 25062.0 |
| duf853 domain-containing protein | D3M79_10005 | Not Available | Positive | 2101240 - 2102739 | 54906.0 |
| uridine phosphorylase | D3M79_10010 | Not Available | Positive | 2102895 - 2103653 | 27289.7 |
| shikimate 5-dehydrogenase | D3M79_10015 | Not Available | Negative | 2103714 - 2104529 | 30014.0 |
| serine o-acetyltransferase | D3M79_10020 | Not Available | Negative | 2104537 - 2105334 | 29108.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | D3M79_10025 | Not Available | Negative | 2105344 - 2106351 | 36755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
