Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3M79_09570 | Not Available | Positive | 2012692 - 2013237 | 20036.6 |
| sdr family oxidoreductase | D3M79_09575 | Not Available | Positive | 2013351 - 2014139 | 28057.5 |
| exoribonuclease ii | D3M79_09580 | Not Available | Positive | 2014204 - 2016183 | 75852.1 |
| hypothetical protein | D3M79_09585 | Not Available | Negative | 2016255 - 2016485 | 8441.35 |
| hypothetical protein | D3M79_09590 | Not Available | Negative | 2016685 - 2016927 | 9386.45 |
| type ii crispr rna-guided endonuclease cas9 | D3M79_09595 | Not Available | Positive | 2017436 - 2020603 | 121542.0 |
| type ii crispr-associated endonuclease cas1 | D3M79_09600 | Not Available | Positive | 2020658 - 2021575 | 34926.8 |
| crispr-associated endonuclease cas2 | D3M79_09605 | Not Available | Positive | 2021568 - 2021894 | 12674.8 |
| 5'-deoxynucleotidase | D3M79_09610 | Not Available | Negative | 2022300 - 2022893 | 22904.4 |
| outer membrane-stress sensor serine endopeptidase degs | D3M79_09615 | Not Available | Negative | 2022901 - 2023923 | 36147.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
