Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | D3M79_09470 | Not Available | Negative | 1993906 - 1995252 | 50626.3 |
| type vi secretion system lipoprotein tssj | D3M79_09475 | Not Available | Negative | 1995256 - 1995939 | 25786.7 |
| hypothetical protein | D3M79_09480 | Not Available | Negative | 1995953 - 1996720 | 29162.7 |
| type vi secretion system baseplate subunit tssg | D3M79_09485 | Not Available | Negative | 1996721 - 1997570 | 32840.1 |
| wd40 repeat domain-containing protein | D3M79_09490 | Not Available | Positive | 1997571 - 1998479 | 34094.4 |
| wd40 repeat domain-containing protein | D3M79_09495 | Not Available | Positive | 1998599 - 1999732 | 42529.7 |
| lta synthase family protein | D3M79_09500 | Not Available | Negative | 1999858 - 2001786 | 72840.8 |
| sel1 repeat family protein | D3M79_09505 | Not Available | Negative | 2001820 - 2002485 | 25320.7 |
| hypothetical protein | D3M79_09510 | Not Available | Negative | 2002491 - 2003213 | 27955.2 |
| rida family protein | D3M79_09515 | Not Available | Positive | 2003325 - 2003675 | 13149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
