Rodentibacter pneumotropicus strain 691_11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 691_11 is a rod-shaped bacterium primarily associated with the order Rodentia. This strain is noteworthy for its singular replicon, indicating a streamlined genomic structure that may contribute to its specific ecological niche. It has been documented to cause health effects in its rodent hosts, particularly leading to the formation of abscesses. The health implications of Rodentibacter pneumotropicus strain 691_11 highlight its potential role in affecting the well-being of rodent populations, which could have cascading effects on ecosystems where these animals serve as key species. The strain is cataloged under the accession number QXNJ00000000.1, which allows for its identification and further study in microbial research. Understanding the pathogenicity of Rodentibacter pneumotropicus strain 691_11 can provide insights into host-pathogen interactions within rodent species. The presence of abscesses suggests that this bacterium may exploit certain vulnerabilities in its hosts, possibly influencing their behavior or fitness. This relationship underscores the importance of studying microbial pathogens in wildlife, as they can significantly impact population dynamics and ecological balance within their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strainstrain 691_11

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 691_11 contig_97, whole genome

Gene Summary

Adenine Count

681512 bp

Thymine Count

682557 bp

Guanine Count

450759 bp

Cytosine Count

454961 bp

Genome Length

2269789 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligaseD3M79_08290Not AvailableNegative1737579 - 173962777115.9
iron-sulfur cluster carrier protein apbcD3M79_08295Not AvailablePositive1739782 - 174089440025.4
had family hydrolaseD3M79_08300Not AvailableNegative1741091 - 174163319436.7
kpsf/gutq family sugar isomeraseD3M79_08305Not AvailableNegative1741643 - 174257834002.2
glycerophosphodiester phosphodiesteraseD3M79_08315Not AvailablePositive1743335 - 174469350873.1
serine-type d-ala-d-ala carboxypeptidaseD3M79_08320Not AvailableNegative1744805 - 174624452615.4
transcription elongation factor greaD3M79_08325Not AvailablePositive1746409 - 174688517493.9
ribosome assembly rna-binding protein yhbyD3M79_08330Not AvailableNegative1746929 - 174722810927.5
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeD3M79_08335Not AvailablePositive1747382 - 174802023797.9
atp-dependent zinc metalloprotease ftshD3M79_08340Not AvailablePositive1748108 - 175001570284.6

Displaying genes 1631 – 1640 of 2097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total