Rodentibacter pneumotropicus strain 691_11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 691_11 is a rod-shaped bacterium primarily associated with the order Rodentia. This strain is noteworthy for its singular replicon, indicating a streamlined genomic structure that may contribute to its specific ecological niche. It has been documented to cause health effects in its rodent hosts, particularly leading to the formation of abscesses. The health implications of Rodentibacter pneumotropicus strain 691_11 highlight its potential role in affecting the well-being of rodent populations, which could have cascading effects on ecosystems where these animals serve as key species. The strain is cataloged under the accession number QXNJ00000000.1, which allows for its identification and further study in microbial research. Understanding the pathogenicity of Rodentibacter pneumotropicus strain 691_11 can provide insights into host-pathogen interactions within rodent species. The presence of abscesses suggests that this bacterium may exploit certain vulnerabilities in its hosts, possibly influencing their behavior or fitness. This relationship underscores the importance of studying microbial pathogens in wildlife, as they can significantly impact population dynamics and ecological balance within their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strainstrain 691_11

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 691_11 contig_97, whole genome

Gene Summary

Adenine Count

681512 bp

Thymine Count

682557 bp

Guanine Count

450759 bp

Cytosine Count

454961 bp

Genome Length

2269789 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
myo-inosose-2 dehydrataseD3M79_00555Not AvailablePositive127465 - 12836133819.5
inositol 2-dehydrogenaseD3M79_00560Not AvailablePositive128364 - 12937436953.3
pts glucose transporter subunit iibD3M79_00565Not AvailablePositive130068 - 13156153779.6
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaD3M79_00570Not AvailableNegative131603 - 13226225149.6
rna polymerase-associated protein rapaD3M79_00575Not AvailableNegative132265 - 135051104919.0
nicotinamide riboside transporter pnucD3M79_00580Not AvailablePositive135231 - 13590525758.8
trna1(val) (adenine(37)-n6)-methyltransferaseD3M79_00585Not AvailableNegative135973 - 13667126571.1
atp-dependent rna helicase srmbD3M79_00590Not AvailablePositive136772 - 13809450044.2
30s ribosomal protein s20D3M79_00595Not AvailableNegative138328 - 1385919636.91
hypothetical proteinD3M79_00600Not AvailableNegative138668 - 13894610818.7

Displaying genes 151 – 160 of 2097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total