Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D3M79_00505 | Not Available | Negative | 113651 - 114604 | 32727.1 |
| sugar abc transporter atp-binding protein | D3M79_00510 | Not Available | Negative | 114654 - 116159 | 55802.4 |
| sugar abc transporter substrate-binding protein | D3M79_00515 | Not Available | Negative | 116229 - 117161 | 34406.0 |
| sugar abc transporter substrate-binding protein | D3M79_00520 | Not Available | Negative | 117243 - 118181 | 33985.0 |
| gfo/idh/moca family oxidoreductase | D3M79_00525 | Not Available | Negative | 118474 - 119613 | 42032.6 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | D3M79_00530 | Not Available | Negative | 119685 - 121193 | 54813.1 |
| 5-deoxy-glucuronate isomerase | D3M79_00535 | Not Available | Positive | 121439 - 122266 | 31578.0 |
| murr/rpir family transcriptional regulator | D3M79_00540 | Not Available | Positive | 122396 - 123229 | 30878.2 |
| 5-dehydro-2-deoxygluconokinase | D3M79_00545 | Not Available | Negative | 123278 - 125194 | 71691.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | D3M79_00550 | Not Available | Positive | 125484 - 127421 | 71638.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
