Rodentibacter pneumotropicus strain 691_11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 691_11 is a rod-shaped bacterium primarily associated with the order Rodentia. This strain is noteworthy for its singular replicon, indicating a streamlined genomic structure that may contribute to its specific ecological niche. It has been documented to cause health effects in its rodent hosts, particularly leading to the formation of abscesses. The health implications of Rodentibacter pneumotropicus strain 691_11 highlight its potential role in affecting the well-being of rodent populations, which could have cascading effects on ecosystems where these animals serve as key species. The strain is cataloged under the accession number QXNJ00000000.1, which allows for its identification and further study in microbial research. Understanding the pathogenicity of Rodentibacter pneumotropicus strain 691_11 can provide insights into host-pathogen interactions within rodent species. The presence of abscesses suggests that this bacterium may exploit certain vulnerabilities in its hosts, possibly influencing their behavior or fitness. This relationship underscores the importance of studying microbial pathogens in wildlife, as they can significantly impact population dynamics and ecological balance within their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strainstrain 691_11

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 691_11 contig_97, whole genome

Gene Summary

Adenine Count

681512 bp

Thymine Count

682557 bp

Guanine Count

450759 bp

Cytosine Count

454961 bp

Genome Length

2269789 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseD3M79_00505Not AvailableNegative113651 - 11460432727.1
sugar abc transporter atp-binding proteinD3M79_00510Not AvailableNegative114654 - 11615955802.4
sugar abc transporter substrate-binding proteinD3M79_00515Not AvailableNegative116229 - 11716134406.0
sugar abc transporter substrate-binding proteinD3M79_00520Not AvailableNegative117243 - 11818133985.0
gfo/idh/moca family oxidoreductaseD3M79_00525Not AvailableNegative118474 - 11961342032.6
methylmalonate-semialdehyde dehydrogenase (coa acylating)D3M79_00530Not AvailableNegative119685 - 12119354813.1
5-deoxy-glucuronate isomeraseD3M79_00535Not AvailablePositive121439 - 12226631578.0
murr/rpir family transcriptional regulatorD3M79_00540Not AvailablePositive122396 - 12322930878.2
5-dehydro-2-deoxygluconokinaseD3M79_00545Not AvailableNegative123278 - 12519471691.8
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)D3M79_00550Not AvailablePositive125484 - 12742171638.6

Displaying genes 141 – 150 of 2097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total