Rodentibacter pneumotropicus strain 691_11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 691_11 is a rod-shaped bacterium primarily associated with the order Rodentia. This strain is noteworthy for its singular replicon, indicating a streamlined genomic structure that may contribute to its specific ecological niche. It has been documented to cause health effects in its rodent hosts, particularly leading to the formation of abscesses. The health implications of Rodentibacter pneumotropicus strain 691_11 highlight its potential role in affecting the well-being of rodent populations, which could have cascading effects on ecosystems where these animals serve as key species. The strain is cataloged under the accession number QXNJ00000000.1, which allows for its identification and further study in microbial research. Understanding the pathogenicity of Rodentibacter pneumotropicus strain 691_11 can provide insights into host-pathogen interactions within rodent species. The presence of abscesses suggests that this bacterium may exploit certain vulnerabilities in its hosts, possibly influencing their behavior or fitness. This relationship underscores the importance of studying microbial pathogens in wildlife, as they can significantly impact population dynamics and ecological balance within their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strainstrain 691_11

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 691_11 contig_97, whole genome

Gene Summary

Adenine Count

681512 bp

Thymine Count

682557 bp

Guanine Count

450759 bp

Cytosine Count

454961 bp

Genome Length

2269789 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-lactate dehydrogenaseD3M79_06080Not AvailablePositive1271704 - 127339863947.4
aldehyde dehydrogenase family proteinD3M79_06085Not AvailablePositive1273511 - 127498953703.3
inorganic pyrophosphataseD3M79_06090Not AvailableNegative1275094 - 127562419726.3
ncs2 family permeaseD3M79_06095Not AvailablePositive1275802 - 127711845269.0
ribosome silencing factorD3M79_06100Not AvailablePositive1277277 - 127758511425.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhD3M79_06105Not AvailablePositive1277639 - 127810617353.2
penicillin-binding protein 2D3M79_06110Not AvailablePositive1278125 - 128008073691.6
rod shape-determining protein rodaD3M79_06115Not AvailablePositive1280080 - 128119541016.8
septal ring lytic transglycosylase rlpa family proteinD3M79_06120Not AvailablePositive1281248 - 128211131772.3
serine-type d-ala-d-ala carboxypeptidaseD3M79_06125Not AvailablePositive1282132 - 128331943673.3

Displaying genes 1221 – 1230 of 2097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total