Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | D3M79_06080 | Not Available | Positive | 1271704 - 1273398 | 63947.4 |
| aldehyde dehydrogenase family protein | D3M79_06085 | Not Available | Positive | 1273511 - 1274989 | 53703.3 |
| inorganic pyrophosphatase | D3M79_06090 | Not Available | Negative | 1275094 - 1275624 | 19726.3 |
| ncs2 family permease | D3M79_06095 | Not Available | Positive | 1275802 - 1277118 | 45269.0 |
| ribosome silencing factor | D3M79_06100 | Not Available | Positive | 1277277 - 1277585 | 11425.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D3M79_06105 | Not Available | Positive | 1277639 - 1278106 | 17353.2 |
| penicillin-binding protein 2 | D3M79_06110 | Not Available | Positive | 1278125 - 1280080 | 73691.6 |
| rod shape-determining protein roda | D3M79_06115 | Not Available | Positive | 1280080 - 1281195 | 41016.8 |
| septal ring lytic transglycosylase rlpa family protein | D3M79_06120 | Not Available | Positive | 1281248 - 1282111 | 31772.3 |
| serine-type d-ala-d-ala carboxypeptidase | D3M79_06125 | Not Available | Positive | 1282132 - 1283319 | 43673.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
