Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 691_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681512 bp
Thymine Count
682557 bp
Guanine Count
450759 bp
Cytosine Count
454961 bp
Genome Length
2269789 bp
Protein-coding Genes
2007 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(2605) synthase rlub | D3M79_05620 | Not Available | Negative | 1172967 - 1173989 | 38988.2 |
| threonylcarbamoyl-amp synthase | D3M79_05625 | Not Available | Negative | 1174030 - 1174653 | 23183.1 |
| succinate--coa ligase subunit alpha | D3M79_05630 | Not Available | Negative | 1174775 - 1175644 | 29881.5 |
| adp-forming succinate--coa ligase subunit beta | D3M79_05635 | Not Available | Negative | 1175647 - 1176813 | 42211.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | D3M79_05640 | Not Available | Negative | 1176912 - 1178141 | 45104.2 |
| 2-oxoglutarate dehydrogenase e1 component | D3M79_05645 | Not Available | Negative | 1178253 - 1181060 | 106905.0 |
| helix-hairpin-helix domain-containing protein | D3M79_05650 | Not Available | Negative | 1181247 - 1181816 | 20772.2 |
| type vi secretion system tip protein vgrg | D3M79_05655 | Not Available | Negative | 1181834 - 1182779 | 35914.7 |
| yeih family protein | D3M79_05660 | Not Available | Negative | 1183003 - 1184010 | 36322.2 |
| trna guanosine(34) transglycosylase tgt | D3M79_05670 | Not Available | Negative | 1184421 - 1185584 | 44236.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
