Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family type i secretion periplasmic adaptor subunit | D3M73_03960 | Not Available | Negative | 772184 - 773608 | 53838.9 |
| type i secretion system permease/atpase | D3M73_03965 | Not Available | Negative | 773610 - 775739 | 80425.0 |
| hypothetical protein | D3M73_03970 | Not Available | Negative | 775849 - 776285 | 17267.2 |
| sodium:alanine symporter family protein | D3M73_03975 | Not Available | Positive | 776804 - 778171 | 48777.2 |
| ribosome-associated translation inhibitor raia | D3M73_03980 | Not Available | Positive | 778409 - 778729 | 12138.5 |
| mfs transporter | D3M73_03985 | Not Available | Negative | 778811 - 780127 | 47063.6 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | D3M73_03990 | Not Available | Negative | 780197 - 780940 | 28089.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | D3M73_03995 | Not Available | Negative | 780972 - 782678 | 63558.4 |
| isochorismate synthase | D3M73_04000 | Not Available | Negative | 782669 - 783961 | 49104.6 |
| pyridoxal phosphate-dependent aminotransferase | D3M73_04010 | Not Available | Positive | 784123 - 785337 | 45128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
