Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | D3M73_03550 | Not Available | Negative | 678702 - 679565 | 31752.3 |
| rod shape-determining protein roda | D3M73_03555 | Not Available | Negative | 679618 - 680733 | 41044.9 |
| penicillin-binding protein 2 | D3M73_03560 | Not Available | Negative | 680733 - 682688 | 73718.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D3M73_03565 | Not Available | Negative | 682707 - 683174 | 17353.2 |
| ribosome silencing factor | D3M73_03570 | Not Available | Negative | 683228 - 683536 | 11425.8 |
| ncs2 family permease | D3M73_03575 | Not Available | Negative | 683695 - 685011 | 45269.9 |
| inorganic pyrophosphatase | D3M73_03580 | Not Available | Positive | 685189 - 685719 | 19726.3 |
| aldehyde dehydrogenase family protein | D3M73_03585 | Not Available | Negative | 685824 - 687302 | 53745.4 |
| d-lactate dehydrogenase | D3M73_03590 | Not Available | Negative | 687415 - 689109 | 63995.5 |
| udp-glucose 4-epimerase gale | D3M73_03595 | Not Available | Positive | 689292 - 690308 | 37106.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
