Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | D3M73_03500 | Not Available | Positive | 667526 - 668788 | 46827.6 |
| rod shape-determining protein mred | D3M73_03505 | Not Available | Negative | 668904 - 669392 | 18723.1 |
| rod shape-determining protein mrec | D3M73_03510 | Not Available | Negative | 669392 - 670444 | 39019.9 |
| rod shape-determining protein | D3M73_03515 | Not Available | Negative | 670519 - 671574 | 37591.8 |
| abc transporter atp-binding protein/permease | D3M73_03520 | Not Available | Negative | 671725 - 673512 | 67967.7 |
| putative transporter | D3M73_03525 | Not Available | Positive | 673677 - 675332 | 59327.1 |
| lipoyl synthase | D3M73_03530 | Not Available | Negative | 675452 - 676414 | 36112.7 |
| lipoyl(octanoyl) transferase lipb | D3M73_03535 | Not Available | Negative | 676463 - 677104 | 24048.1 |
| duf493 family protein | D3M73_03540 | Not Available | Negative | 677106 - 677384 | 10476.7 |
| serine-type d-ala-d-ala carboxypeptidase | D3M73_03545 | Not Available | Negative | 677494 - 678681 | 43713.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
