Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate diphosphatase | D3M73_02910 | Not Available | Positive | 574392 - 574880 | 19220.9 |
| yebc/pmpr family dna-binding transcriptional regulator | D3M73_02915 | Not Available | Positive | 574901 - 575641 | 26451.1 |
| crossover junction endodeoxyribonuclease ruvc | D3M73_02920 | Not Available | Positive | 575689 - 576261 | 20803.5 |
| holliday junction branch migration protein ruva | D3M73_02925 | Not Available | Positive | 576322 - 576936 | 22673.8 |
| holliday junction branch migration dna helicase ruvb | D3M73_02930 | Not Available | Positive | 576947 - 577954 | 37257.1 |
| recombinase xerd | D3M73_02935 | Not Available | Negative | 578020 - 578325 | 11176.7 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | D3M73_02940 | Not Available | Positive | 578738 - 580303 | 57892.7 |
| cytochrome d ubiquinol oxidase subunit ii | D3M73_02945 | Not Available | Positive | 580318 - 581454 | 42216.9 |
| cyd operon protein ybge | D3M73_02950 | Not Available | Positive | 581565 - 581849 | 11066.9 |
| tol-pal system-associated acyl-coa thioesterase | D3M73_02955 | Not Available | Positive | 581941 - 582363 | 16148.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
