Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | D3M73_01570 | Not Available | Positive | 308629 - 309291 | 24171.3 |
| peptide-methionine (r)-s-oxide reductase | D3M73_01575 | Not Available | Positive | 309584 - 310651 | 40378.6 |
| cytochrome c biogenesis protein ccda | D3M73_01580 | Not Available | Positive | 310756 - 311397 | 22768.9 |
| hypothetical protein | D3M73_01585 | Not Available | Positive | 311517 - 311987 | 17845.7 |
| hypothetical protein | D3M73_01590 | Not Available | Negative | 312371 - 312721 | 13258.8 |
| sigma-70 family rna polymerase sigma factor | D3M73_01595 | Not Available | Positive | 312835 - 313383 | 21554.8 |
| zf-hc2 domain-containing protein | D3M73_01600 | Not Available | Positive | 313393 - 313572 | 6890.53 |
| alcohol dehydrogenase | D3M73_01605 | Not Available | Positive | 313924 - 315009 | 39370.8 |
| lrp/asnc family transcriptional regulator | D3M73_01610 | Not Available | Negative | 315395 - 315814 | 15611.0 |
| ornithine cyclodeaminase | D3M73_01615 | Not Available | Positive | 315966 - 317024 | 38864.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
