Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding protein dksa | D3M73_01520 | Not Available | Positive | 300119 - 300556 | 16723.9 |
| polynucleotide adenylyltransferase pcnb | D3M73_01525 | Not Available | Positive | 300786 - 302090 | 50779.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D3M73_01530 | Not Available | Positive | 302094 - 302570 | 18164.0 |
| duf496 family protein | D3M73_01535 | Not Available | Negative | 302622 - 302963 | 13769.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D3M73_01540 | Not Available | Positive | 303144 - 304229 | 40128.3 |
| histidinol-phosphate transaminase | D3M73_01545 | Not Available | Positive | 304261 - 305370 | 40845.9 |
| thiol peroxidase | D3M73_01550 | Not Available | Positive | 305379 - 305876 | 17909.5 |
| serine--trna ligase | D3M73_01555 | Not Available | Negative | 305932 - 307221 | 47846.6 |
| duf465 domain-containing protein | D3M73_01560 | Not Available | Positive | 307470 - 307688 | 8711.5 |
| hypothetical protein | D3M73_01565 | Not Available | Negative | 307727 - 308530 | 29862.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
