Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | D3M73_01365 | Not Available | Negative | 268798 - 270117 | 49968.4 |
| d-xylose abc transporter substrate-binding protein | D3M73_01370 | Not Available | Positive | 270356 - 271354 | 35932.2 |
| d-xylose abc transporter atp-binding protein | D3M73_01375 | Not Available | Positive | 271400 - 272911 | 55775.3 |
| sugar abc transporter permease | D3M73_01380 | Not Available | Positive | 272915 - 274042 | 39756.1 |
| xylose operon transcription regulator xylr | D3M73_01385 | Not Available | Positive | 274142 - 275311 | 44899.6 |
| dna-binding transcriptional repressor deor | D3M73_01390 | Not Available | Negative | 275363 - 276100 | 27275.2 |
| deoxyribose-phosphate aldolase | D3M73_01395 | Not Available | Negative | 276117 - 276791 | 24113.3 |
| ribokinase | D3M73_01400 | Not Available | Positive | 276948 - 277868 | 33514.3 |
| l-fucose:h+ symporter permease | D3M73_01405 | Not Available | Positive | 277881 - 279170 | 47662.7 |
| duf4432 family protein | D3M73_01410 | Not Available | Positive | 279181 - 280197 | 38823.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
