Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | D3M73_07850 | Not Available | Positive | 1561171 - 1561818 | 24101.4 |
| hypothetical protein | D3M73_07855 | Not Available | Negative | 1562068 - 1562682 | 22342.3 |
| histidine--trna ligase | D3M73_07860 | Not Available | Negative | 1562701 - 1563972 | 47644.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D3M73_07865 | Not Available | Negative | 1563982 - 1565088 | 40113.6 |
| helix-turn-helix domain-containing protein | D3M73_07870 | Not Available | Negative | 1565101 - 1566087 | 36477.9 |
| type iv pilus biogenesis/stability protein pilw | D3M73_07875 | Not Available | Negative | 1566158 - 1566703 | 20936.8 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | D3M73_07880 | Not Available | Negative | 1566722 - 1567876 | 43153.2 |
| d-alanyl-d-alanine carboxypeptidase | D3M73_07885 | Not Available | Positive | 1568092 - 1568976 | 33146.5 |
| metal abc transporter substrate-binding protein | D3M73_07890 | Not Available | Positive | 1569226 - 1570107 | 32661.2 |
| manganese/iron abc transporter atp-binding protein | D3M73_07895 | Not Available | Positive | 1570107 - 1571009 | 33558.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
