Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | D3M73_06890 | Not Available | Positive | 1373151 - 1375004 | 69487.2 |
| bile acid:sodium symporter family protein | D3M73_06895 | Not Available | Negative | 1375067 - 1375999 | 33171.0 |
| abc transporter atp-binding protein | D3M73_06900 | Not Available | Negative | 1376063 - 1376872 | 30609.2 |
| atp-binding cassette domain-containing protein | D3M73_06905 | Not Available | Negative | 1376875 - 1377927 | 39431.9 |
| antimicrobial peptide abc transporter permease sapc | D3M73_06910 | Not Available | Negative | 1377930 - 1378817 | 33157.3 |
| abc transporter permease subunit | D3M73_06915 | Not Available | Negative | 1378807 - 1379772 | 36286.3 |
| abc transporter substrate-binding protein | D3M73_06920 | Not Available | Negative | 1379772 - 1381469 | 64993.5 |
| ycjx family protein | D3M73_06925 | Not Available | Positive | 1381539 - 1382981 | 55350.6 |
| duf535 domain-containing protein | D3M73_06930 | Not Available | Negative | 1382983 - 1383822 | 33601.3 |
| tigr01620 family protein | D3M73_06935 | Not Available | Positive | 1383946 - 1385001 | 40034.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
