Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | strain 602_16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709714 bp
Thymine Count
706115 bp
Guanine Count
468419 bp
Cytosine Count
477367 bp
Genome Length
2361615 bp
Protein-coding Genes
2030 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter substrate-binding protein oppa | D3M73_05975 | Not Available | Positive | 1171778 - 1173415 | 61273.1 |
| oligopeptide abc transporter permease oppb | D3M73_05980 | Not Available | Positive | 1173530 - 1174450 | 33754.5 |
| oligopeptide abc transporter permease oppc | D3M73_05985 | Not Available | Positive | 1174460 - 1175383 | 34115.6 |
| abc transporter atp-binding protein | D3M73_05990 | Not Available | Positive | 1175393 - 1176394 | 36959.2 |
| oligopeptide abc transporter atp-binding protein oppf | D3M73_05995 | Not Available | Positive | 1176391 - 1177380 | 36703.2 |
| large-conductance mechanosensitive channel protein mscl | D3M73_06000 | Not Available | Negative | 1177495 - 1177884 | 14049.7 |
| trk system potassium transporter trka | D3M73_06005 | Not Available | Negative | 1177953 - 1179329 | 50132.6 |
| glycosyltransferase family 2 protein | D3M73_06010 | Not Available | Negative | 1179326 - 1180132 | 29489.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | D3M73_06015 | Not Available | Negative | 1180150 - 1181532 | 51692.7 |
| methionyl-trna formyltransferase | D3M73_06020 | Not Available | Negative | 1181532 - 1182488 | 34944.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
