Colwellia sp. RSH04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. RSH04 is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. This trait may facilitate its adaptation to various environments, particularly in aquatic ecosystems where movement through liquid media can be advantageous for nutrient acquisition and colonization. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and cellular function. The genomic data for Colwellia sp. RSH04, available under the accession number QXIO00000000.1, provides a foundation for further genetic and functional studies, potentially shedding light on its metabolic capabilities and ecological roles. Colwellia species are often found in cold marine environments, and their adaptations to low temperatures may have significant implications for biogeochemical cycles in these habitats. The presence of flagella in Colwellia sp. RSH04 suggests that this bacterium can navigate its environment effectively, which may influence its interactions with other microorganisms and its role in nutrient cycling. Understanding the specific adaptations and ecological functions of Colwellia sp. RSH04 could enhance our knowledge of microbial life in extreme environments and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. RSH04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. RSH04 RSH04_scaffold76, whole genome shotgun

Gene Summary

Adenine Count

1306931 bp

Thymine Count

1298779 bp

Guanine Count

758302 bp

Cytosine Count

784464 bp

Genome Length

4149027 bp

Protein-coding Genes

3554 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factor yiddD1094_09435Not AvailableNegative2177247 - 21774959125.26
ribonuclease p protein componentD1094_09440Not AvailableNegative2177462 - 217783314512.7
50s ribosomal protein l34D1094_09445Not AvailableNegative2177874 - 21780085038.31
chromosomal replication initiator protein dnaaD1094_09450Not AvailablePositive2178513 - 217990452454.6
dna polymerase iii subunit betaD1094_09455Not AvailablePositive2179937 - 218104041087.2
dna replication/repair protein recfD1094_09460Not AvailablePositive2181049 - 218217943025.1
dna topoisomerase (atp-hydrolyzing) subunit bD1094_09465Not AvailablePositive2182189 - 218462490497.2
glycine--trna ligase subunit alphaD1094_09470Not AvailablePositive2184763 - 218568635426.0
glycine--trna ligase subunit betaD1094_09475Not AvailablePositive2185686 - 218775276970.3
trar/dksa family transcriptional regulatorD1094_09485Not AvailablePositive2189162 - 218947611820.9

Displaying genes 1871 – 1880 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.