Colwellia sp. RSH04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. RSH04 is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. This trait may facilitate its adaptation to various environments, particularly in aquatic ecosystems where movement through liquid media can be advantageous for nutrient acquisition and colonization. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and cellular function. The genomic data for Colwellia sp. RSH04, available under the accession number QXIO00000000.1, provides a foundation for further genetic and functional studies, potentially shedding light on its metabolic capabilities and ecological roles. Colwellia species are often found in cold marine environments, and their adaptations to low temperatures may have significant implications for biogeochemical cycles in these habitats. The presence of flagella in Colwellia sp. RSH04 suggests that this bacterium can navigate its environment effectively, which may influence its interactions with other microorganisms and its role in nutrient cycling. Understanding the specific adaptations and ecological functions of Colwellia sp. RSH04 could enhance our knowledge of microbial life in extreme environments and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. RSH04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. RSH04 RSH04_scaffold76, whole genome shotgun

Gene Summary

Adenine Count

1306931 bp

Thymine Count

1298779 bp

Guanine Count

758302 bp

Cytosine Count

784464 bp

Genome Length

4149027 bp

Protein-coding Genes

3554 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyllysine-residue acetyltransferaseD1094_08055Not AvailableNegative1857563 - 185922757666.2
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeD1094_08060Not AvailableNegative1859254 - 186192999686.8
pyruvate dehydrogenase complex transcriptional repressor pdhrD1094_08065Not AvailableNegative1862153 - 186292028694.8
transcriptional regulatorD1094_08070Not AvailableNegative1863209 - 18634097431.11
hypothetical proteinD1094_08075Not AvailableNegative1863411 - 186388118134.3
beta-lactamase regulator ampeD1094_08080Not AvailableNegative1864064 - 186499335131.6
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdD1094_08085Not AvailableNegative1865037 - 186560020553.2
tigr02281 family clan aa aspartic proteaseD1094_08090Not AvailablePositive1865679 - 186619719109.2
carboxylating nicotinate-nucleotide diphosphorylaseD1094_08095Not AvailablePositive1866201 - 186709732065.3
lysr family transcriptional regulator argpD1094_08100Not AvailableNegative1867144 - 186804633660.2

Displaying genes 1601 – 1610 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.