Colwellia sp. RSH04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. RSH04 is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. This trait may facilitate its adaptation to various environments, particularly in aquatic ecosystems where movement through liquid media can be advantageous for nutrient acquisition and colonization. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and cellular function. The genomic data for Colwellia sp. RSH04, available under the accession number QXIO00000000.1, provides a foundation for further genetic and functional studies, potentially shedding light on its metabolic capabilities and ecological roles. Colwellia species are often found in cold marine environments, and their adaptations to low temperatures may have significant implications for biogeochemical cycles in these habitats. The presence of flagella in Colwellia sp. RSH04 suggests that this bacterium can navigate its environment effectively, which may influence its interactions with other microorganisms and its role in nutrient cycling. Understanding the specific adaptations and ecological functions of Colwellia sp. RSH04 could enhance our knowledge of microbial life in extreme environments and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. RSH04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. RSH04 RSH04_scaffold76, whole genome shotgun

Gene Summary

Adenine Count

1306931 bp

Thymine Count

1298779 bp

Guanine Count

758302 bp

Cytosine Count

784464 bp

Genome Length

4149027 bp

Protein-coding Genes

3554 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeD1094_08005Not AvailableNegative1844064 - 184639785557.1
duf4981 domain-containing proteinD1094_08010Not AvailableNegative1846394 - 1849627122586.0
fadr family transcriptional regulatorD1094_08015Not AvailablePositive1849817 - 185053627180.6
collagenaseD1094_08020Not AvailableNegative1850710 - 185167236874.4
sigma-70 family rna polymerase sigma factorD1094_08025Not AvailablePositive1852229 - 185272318392.4
zf-hc2 domain-containing proteinD1094_08030Not AvailablePositive1852728 - 185317416857.3
ybjq family proteinD1094_08035Not AvailablePositive1853171 - 185350312145.8
cpbp family intramembrane metalloproteaseD1094_08040Not AvailablePositive1853571 - 185434728787.7
energy transducer tonbD1094_08045Not AvailableNegative1854689 - 185578941526.7
dihydrolipoyl dehydrogenaseD1094_08050Not AvailableNegative1855939 - 185736950364.6

Displaying genes 1591 – 1600 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.