Colwellia sp. RSH04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. RSH04 is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. This trait may facilitate its adaptation to various environments, particularly in aquatic ecosystems where movement through liquid media can be advantageous for nutrient acquisition and colonization. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and cellular function. The genomic data for Colwellia sp. RSH04, available under the accession number QXIO00000000.1, provides a foundation for further genetic and functional studies, potentially shedding light on its metabolic capabilities and ecological roles. Colwellia species are often found in cold marine environments, and their adaptations to low temperatures may have significant implications for biogeochemical cycles in these habitats. The presence of flagella in Colwellia sp. RSH04 suggests that this bacterium can navigate its environment effectively, which may influence its interactions with other microorganisms and its role in nutrient cycling. Understanding the specific adaptations and ecological functions of Colwellia sp. RSH04 could enhance our knowledge of microbial life in extreme environments and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. RSH04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. RSH04 RSH04_scaffold76, whole genome shotgun

Gene Summary

Adenine Count

1306931 bp

Thymine Count

1298779 bp

Guanine Count

758302 bp

Cytosine Count

784464 bp

Genome Length

4149027 bp

Protein-coding Genes

3554 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thrombospondin type 3 repeat-/calx-beta domain-containing proteinD1094_05240Not AvailableNegative1213659 - 1217807147916.0
hypothetical proteinD1094_05245Not AvailableNegative1217944 - 121852522377.1
tigr02922 family proteinD1094_05250Not AvailableNegative1218884 - 12191058222.94
gamma-glutamyltransferaseD1094_05255Not AvailableNegative1219209 - 122100564922.3
dtw domain-containing proteinD1094_05260Not AvailableNegative1221027 - 122166824171.3
rhombosortaseD1094_05265Not AvailablePositive1221742 - 122234722951.4
s9 family peptidaseD1094_05270Not AvailableNegative1222415 - 122492895844.4
secc motif-containing proteinD1094_05275Not AvailablePositive1225081 - 122561120915.6
hypothetical proteinD1094_05280Not AvailableNegative1225683 - 122628822828.0
two-component sensor histidine kinaseD1094_05285Not AvailableNegative1226400 - 122768048247.0

Displaying genes 1041 – 1050 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.