Colwellia sp. RSH04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. RSH04 is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. This trait may facilitate its adaptation to various environments, particularly in aquatic ecosystems where movement through liquid media can be advantageous for nutrient acquisition and colonization. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and cellular function. The genomic data for Colwellia sp. RSH04, available under the accession number QXIO00000000.1, provides a foundation for further genetic and functional studies, potentially shedding light on its metabolic capabilities and ecological roles. Colwellia species are often found in cold marine environments, and their adaptations to low temperatures may have significant implications for biogeochemical cycles in these habitats. The presence of flagella in Colwellia sp. RSH04 suggests that this bacterium can navigate its environment effectively, which may influence its interactions with other microorganisms and its role in nutrient cycling. Understanding the specific adaptations and ecological functions of Colwellia sp. RSH04 could enhance our knowledge of microbial life in extreme environments and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. RSH04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. RSH04 RSH04_scaffold76, whole genome shotgun

Gene Summary

Adenine Count

1306931 bp

Thymine Count

1298779 bp

Guanine Count

758302 bp

Cytosine Count

784464 bp

Genome Length

4149027 bp

Protein-coding Genes

3554 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hdod domain-containing proteinD1094_00450Not AvailableNegative113233 - 11439643623.7
atp-dependent helicaseD1094_00455Not AvailableNegative114602 - 11597250045.9
protein translocase subunit secfD1094_00460Not AvailableNegative116204 - 11715134315.0
protein translocase subunit secdD1094_00465Not AvailableNegative117173 - 11902066644.7
preprotein translocase subunit yajcD1094_00470Not AvailableNegative119170 - 11950511825.8
trna guanosine(34) transglycosylase tgtD1094_00475Not AvailableNegative119581 - 12073843229.1
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaD1094_00480Not AvailableNegative120838 - 12189638982.5
bifunctional isocitrate dehydrogenase kinase/phosphataseD1094_00485Not AvailablePositive122230 - 12399068252.8
Trna-trpNot AvailableNot AvailablePositive124142 - 124218Not Available
dna polymerase iii subunit psiD1094_00495Not AvailablePositive124305 - 12468514688.4

Displaying genes 91 – 100 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.