Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Injection protein | D3C88_12070 | Not Available | Positive | 1732651 - 1734480 | 64771.8 |
| Hypothetical protein | D3C88_12075 | Not Available | Negative | 1734505 - 1734873 | 13082.5 |
| Hypothetical protein | D3C88_12080 | Not Available | Positive | 1735269 - 1735712 | 16962.2 |
| Hypothetical protein | D3C88_12085 | Not Available | Positive | 1735718 - 1736140 | 16231.6 |
| Head maturation protease | D3C88_12090 | Not Available | Negative | 1736193 - 1736729 | 19576.3 |
| Mnt protein | D3C88_12095 | Not Available | Negative | 1736729 - 1736977 | 9040.83 |
| Arc | D3C88_12100 | Not Available | Positive | 1737092 - 1737244 | 5720.06 |
| Phage antirepressor protein | D3C88_12105 | Not Available | Positive | 1737478 - 1738407 | 35401.6 |
| Tail fibers protein | D3C88_12110 | Not Available | Positive | 1738508 - 1741456 | 109321.0 |
| Acetyltransferase | D3C88_12115 | Not Available | Positive | 1741610 - 1742323 | 26218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





