Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase small subunit | D3C88_04750 | Not Available | Negative | 721558 - 722342 | 29147.9 |
| glutamate synthase | D3C88_04755 | Not Available | Negative | 722355 - 722530 | 6300.49 |
| murr/rpir family transcriptional regulator | D3C88_04760 | Not Available | Negative | 722531 - 722795 | 9936.72 |
| lysr family transcriptional regulator | D3C88_04765 | Not Available | Negative | 722996 - 723848 | 31707.4 |
| hypothetical protein | D3C88_04770 | Not Available | Negative | 723935 - 724486 | 19774.6 |
| sec-independent protein translocase subunit tata | D3C88_04775 | Not Available | Positive | 724624 - 724830 | 7456.5 |
| sec-independent protein translocase subunit tatb | D3C88_04780 | Not Available | Positive | 724834 - 725349 | 18451.8 |
| twin-arginine translocase subunit tatc | D3C88_04785 | Not Available | Positive | 725352 - 726128 | 28893.9 |
| hlyd family secretion protein | D3C88_04790 | Not Available | Positive | 726234 - 726597 | 13151.6 |
| fusc family protein | D3C88_04795 | Not Available | Positive | 726597 - 728609 | 75334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





