Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna starvation/stationary phase protection protein | D3C88_04495 | Not Available | Positive | 681506 - 682009 | 18696.3 |
| hypothetical protein | D3C88_04500 | Not Available | Positive | 682074 - 682340 | 10244.5 |
| periplasmic nitrate reductase subunit alpha | D3C88_04505 | Not Available | Positive | 682341 - 682810 | 17552.1 |
| ferredoxin-type protein napg | D3C88_04510 | Not Available | Positive | 682817 - 683062 | 8613.5 |
| transcriptional regulator tyrr | D3C88_04515 | Not Available | Positive | 683063 - 683797 | 27636.1 |
| 2-cys peroxiredoxin | D3C88_04520 | Not Available | Negative | 683841 - 684347 | 17836.3 |
| hypothetical protein | D3C88_04525 | Not Available | Positive | 684466 - 684656 | 7042.44 |
| m20/m25/m40 family metallo-hydrolase | D3C88_04530 | Not Available | Positive | 684657 - 685051 | 14993.3 |
| cupin domain-containing protein | D3C88_04535 | Not Available | Negative | 685100 - 685270 | 6001.96 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | D3C88_04540 | Not Available | Negative | 685271 - 685792 | 18675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





