Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | D3C88_04345 | Not Available | Positive | 657037 - 657246 | 8349.69 |
| transcriptional regulator zur | D3C88_04350 | Not Available | Negative | 657288 - 657803 | 19308.3 |
| trna dihydrouridine(20/20a) synthase dusa | D3C88_04355 | Not Available | Positive | 657959 - 658954 | 36905.3 |
| envelope stress response protein pspg | D3C88_04360 | Not Available | Positive | 659088 - 659330 | 9086.03 |
| quinone oxidoreductase | D3C88_04365 | Not Available | Negative | 659495 - 660439 | 33739.4 |
| fad-dependent oxidoreductase | D3C88_04370 | Not Available | Negative | 660440 - 660804 | 12558.3 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | D3C88_04375 | Not Available | Negative | 660816 - 661862 | 38300.5 |
| 2-hydroxy-3-oxopropionate reductase | D3C88_04380 | Not Available | Negative | 661863 - 661994 | 4485.72 |
| hydroxypyruvate isomerase | D3C88_04385 | Not Available | Negative | 662094 - 662870 | 29417.1 |
| glyoxylate carboligase | D3C88_04390 | Not Available | Negative | 662883 - 664664 | 64778.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





