Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator sgrr | D3C88_04295 | Not Available | Negative | 649880 - 650538 | 25681.0 |
| glucose uptake inhibitor sgrt | D3C88_04300 | Not Available | Positive | 650627 - 650752 | 5219.29 |
| hypothetical protein | D3C88_04305 | Not Available | Positive | 650753 - 651146 | 14302.6 |
| duf1768 domain-containing protein | D3C88_04310 | Not Available | Negative | 651311 - 651616 | 11460.0 |
| atp-dependent helicase ding | D3C88_04315 | Not Available | Positive | 651615 - 653765 | 81445.9 |
| dna-binding protein ybib | D3C88_04320 | Not Available | Positive | 653793 - 654147 | 12980.1 |
| aminotransferase class v-fold plp-dependent enzyme | D3C88_04325 | Not Available | Negative | 654148 - 654438 | 10697.6 |
| signal peptide peptidase sppa | D3C88_04330 | Not Available | Negative | 654435 - 654945 | 18852.5 |
| repressor lexa | D3C88_04335 | Not Available | Positive | 654946 - 655523 | 21102.5 |
| mate family efflux transporter dinf | D3C88_04340 | Not Available | Positive | 655542 - 656921 | 49656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





