Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | D3C88_04240 | Not Available | Positive | 644694 - 645061 | 12710.4 |
| cmd domain-containing protein | D3C88_04245 | Not Available | Positive | 645206 - 645844 | 23989.5 |
| protein ninh | D3C88_04250 | Not Available | Negative | 645845 - 645949 | 3858.81 |
| rusa family crossover junction endodeoxyribonuclease | D3C88_04255 | Not Available | Negative | 645946 - 646308 | 14081.0 |
| hypothetical protein | D3C88_04265 | Not Available | Negative | 646595 - 646864 | 10550.5 |
| protein ninf | D3C88_04270 | Not Available | Negative | 646857 - 647027 | 6451.43 |
| nine family protein | D3C88_04275 | Not Available | Negative | 647024 - 647206 | 7518.18 |
| recombination protein ninb | D3C88_04280 | Not Available | Negative | 647203 - 647613 | 15648.9 |
| hypothetical protein | D3C88_04285 | Not Available | Negative | 647585 - 647941 | 13802.1 |
| bifunctional dna primase/helicase | D3C88_04290 | Not Available | Negative | 648242 - 649879 | 62309.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





