Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate:quinone oxidoreductase | D3C88_04125 | Not Available | Positive | 628595 - 629260 | 24446.4 |
| ecotin | D3C88_04130 | Not Available | Negative | 629410 - 629898 | 18180.0 |
| hypothetical protein | D3C88_04135 | Not Available | Negative | 630033 - 630206 | 6598.22 |
| ferredoxin-type protein napf | D3C88_04140 | Not Available | Positive | 630306 - 630800 | 18048.3 |
| chaperone napd | D3C88_04145 | Not Available | Positive | 630790 - 631053 | 9473.02 |
| twin-arginine translocation signal domain-containing protein | D3C88_04150 | Not Available | Positive | 631050 - 631667 | 22454.1 |
| exodeoxyribonuclease v subunit beta | D3C88_04155 | Not Available | Negative | 631668 - 632157 | 18893.9 |
| flagellar motor switch protein flim | D3C88_04160 | Not Available | Positive | 632158 - 632503 | 13039.7 |
| flagellar motor switch protein flin | D3C88_04165 | Not Available | Positive | 632500 - 632885 | 13666.3 |
| 50s ribosomal protein l34 | D3C88_04170 | Not Available | Negative | 632909 - 633049 | 5380.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





