Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm | D3C88_04020 | Not Available | Negative | 618633 - 619261 | 23170.3 |
| zinc abc transporter substrate-binding protein znua | D3C88_04025 | Not Available | Negative | 619277 - 620209 | 33935.4 |
| mn2+/zn2+abc transporter atp-binding protein | D3C88_04030 | Not Available | Positive | 620288 - 621043 | 27869.3 |
| zinc abc transporter permease subunit znub | D3C88_04035 | Not Available | Positive | 621040 - 621825 | 27778.5 |
| holliday junction branch migration dna helicase ruvb | D3C88_04040 | Not Available | Negative | 622042 - 623052 | 37176.0 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | D3C88_04045 | Not Available | Positive | 623102 - 623537 | 15391.4 |
| cell division protein dedd | D3C88_04050 | Not Available | Positive | 623527 - 623785 | 8991.82 |
| replication protein o | D3C88_04055 | Not Available | Positive | 623786 - 624005 | 8494.05 |
| replication protein p | D3C88_04060 | Not Available | Positive | 624002 - 624703 | 26538.1 |
| protein ren | D3C88_04065 | Not Available | Positive | 624700 - 624990 | 10642.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





