Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein dsrb | D3C88_03970 | Not Available | Negative | 609403 - 609645 | 9071.8 |
| duf2525 domain-containing protein | D3C88_03975 | Not Available | Positive | 609754 - 609981 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | D3C88_03980 | Not Available | Positive | 610279 - 611094 | 30517.2 |
| cellulose biosynthesis regulator yedq | D3C88_03985 | Not Available | Negative | 611091 - 612575 | 56161.6 |
| excinuclease abc subunit c | D3C88_03990 | Not Available | Positive | 612576 - 613096 | 18952.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | D3C88_03995 | Not Available | Positive | 613153 - 613570 | 15693.5 |
| type 1 fimbrial protein | D3C88_04000 | Not Available | Positive | 613740 - 614282 | 19017.6 |
| fimbrial assembly protein | D3C88_04005 | Not Available | Positive | 614363 - 615031 | 24590.0 |
| fimbrial biogenesis outer membrane usher protein | D3C88_04010 | Not Available | Positive | 615047 - 617527 | 92366.3 |
| putative fimbrial-like adhesin protein | D3C88_04015 | Not Available | Positive | 617543 - 618577 | 36927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





