Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_03920 | Not Available | Positive | 602056 - 602665 | 22006.4 |
| duf1307 domain-containing protein | D3C88_03925 | Not Available | Positive | 602790 - 603251 | 16623.0 |
| duf1456 family protein | D3C88_03930 | Not Available | Negative | 603292 - 603762 | 18018.0 |
| dna-binding response regulator | D3C88_03935 | Not Available | Negative | 603809 - 604528 | 27401.4 |
| sensor histidine kinase | D3C88_03940 | Not Available | Negative | 604525 - 605646 | 41866.5 |
| phosphate acetyltransferase | D3C88_03945 | Not Available | Negative | 605647 - 606900 | 45846.9 |
| flagellar biosynthetic protein flip | D3C88_03950 | Not Available | Positive | 606901 - 607373 | 17351.9 |
| flagellar biosynthetic protein fliq | D3C88_03955 | Not Available | Positive | 607383 - 607652 | 9632.54 |
| flagellar type iii secretion system protein flir | D3C88_03960 | Not Available | Positive | 607661 - 608446 | 28537.3 |
| transcriptional regulator rcsa | D3C88_03965 | Not Available | Positive | 608736 - 609359 | 23541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





