Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | D3C88_03460 | Not Available | Positive | 534061 - 534600 | 19671.2 |
| duf905 domain-containing protein | D3C88_03465 | Not Available | Positive | 534662 - 534895 | 9099.71 |
| chromosome partitioning protein parb | D3C88_03470 | Not Available | Positive | 534960 - 535362 | 14311.4 |
| nad(p)h-flavin reductase | D3C88_03475 | Not Available | Positive | 535363 - 536042 | 25345.3 |
| acetyl-coa c-acyltransferase fada | D3C88_03480 | Not Available | Negative | 536325 - 537488 | 40825.6 |
| fatty acid oxidation complex subunit alpha fadb | D3C88_03485 | Not Available | Negative | 537498 - 538797 | 47751.9 |
| hypothetical protein | D3C88_03495 | Not Available | Positive | 539223 - 539552 | 12040.7 |
| phage tail protein | D3C88_03540 | Not Available | Negative | 545757 - 546133 | 13935.0 |
| anthranilate/aminodeoxychorismate synthase component ii | D3C88_03545 | Not Available | Positive | 546134 - 546338 | 7868.29 |
| aspartate aminotransferase family protein | D3C88_03550 | Not Available | Positive | 546424 - 547644 | 43836.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





