Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3C88_03360 | Not Available | Positive | 519641 - 519863 | 8589.46 |
| l-ribulose-5-phosphate 4-epimerase | D3C88_03365 | Not Available | Negative | 519864 - 520482 | 22657.0 |
| l-ribulose-5-phosphate 3-epimerase | D3C88_03370 | Not Available | Negative | 520476 - 521336 | 32478.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | D3C88_03375 | Not Available | Negative | 521329 - 521661 | 11937.2 |
| ribonuclease i | D3C88_03380 | Not Available | Positive | 521662 - 522199 | 19479.1 |
| hypothetical protein | D3C88_03385 | Not Available | Negative | 522256 - 522441 | 7044.48 |
| nucleoside diphosphate kinase regulator | D3C88_03390 | Not Available | Positive | 522429 - 522839 | 14928.0 |
| universal stress protein uspg | D3C88_03395 | Not Available | Positive | 523195 - 523623 | 15994.2 |
| alkyl hydroperoxide reductase subunit f | D3C88_03400 | Not Available | Negative | 523744 - 524860 | 39526.4 |
| bifunctional glycosyl transferase/transpeptidase | D3C88_03405 | Not Available | Positive | 524861 - 527166 | 85228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





