Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain S308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262456 bp
Thymine Count
1260045 bp
Guanine Count
1272289 bp
Cytosine Count
1272432 bp
Genome Length
5067372 bp
Protein-coding Genes
6432 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pili assembly chaperone | D3C88_03105 | Not Available | Positive | 479338 - 480405 | 38613.0 |
| pilus assembly protein pilp | D3C88_03110 | Not Available | Positive | 480405 - 480842 | 15718.0 |
| piln family type ivb pilus formation outer membrane protein | D3C88_03115 | Not Available | Positive | 480856 - 482538 | 59854.8 |
| pilus assembly protein pilo | D3C88_03120 | Not Available | Positive | 482531 - 483826 | 48105.7 |
| type iv pilus biogenesis protein pilp | D3C88_03125 | Not Available | Positive | 483813 - 484265 | 16019.2 |
| atp-binding protein | D3C88_03130 | Not Available | Positive | 484276 - 485829 | 58286.3 |
| pilus assembly protein pilr | D3C88_03135 | Not Available | Positive | 485842 - 486939 | 41419.4 |
| pilus assembly protein pilx | D3C88_03140 | Not Available | Positive | 486957 - 487571 | 21240.2 |
| lytic transglycosylase | D3C88_03145 | Not Available | Positive | 487581 - 488141 | 20760.4 |
| prepilin peptidase | D3C88_03150 | Not Available | Positive | 488126 - 488782 | 24533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





